PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100028450031
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family AP2
Protein Properties Length: 274aa    MW: 30748 Da    PI: 9.7002
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100028450031genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.82e-11127182255
                           AP2   2 gykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                    ++GV++++++gr++A+++d  +     ++ k  + g ++ +e+Aa+a++ a+ k++g
  Ote100028450031|100028450031 127 IFRGVTRHRWTGRYEAHLWDnSCR-RegQSrKGRQ-GGYDKEEKAARAYDLAAIKYWG 182
                                   69******************5444.2455536655.779999**************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541719.81E-15126191IPR016177DNA-binding domain
CDDcd000182.10E-17126191No hitNo description
PfamPF008477.0E-9127182IPR001471AP2/ERF domain
PROSITE profilePS5103216.871127190IPR001471AP2/ERF domain
SMARTSM003806.5E-22127196IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.4E-12127190IPR001471AP2/ERF domain
SMARTSM003800.051226263IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    Send to blast
MDMXXXXXXX XHPNWLVFSL SNHSLFQPSF SSLPSSSAGV DPDDNGSGRA IAGPKLEDFL  60
GGGGASSMPD VDIYDDSELK TIAASFLRGF SSDQQNDNSQ KQIAAAPPPP DPPAKKTVES  120
FGQRTSIFRG VTRHRWTGRY EAHLWDNSCR REGQSRKGRQ GGYDKEEKAA RAYDLAAIKY  180
WGPTTTTNFP VCDYAKEMEE MKHMTRQEFV ASLRRRSSGF SRGASIYRGV TRHHQHGRWQ  240
ARIGRVAGNK DLYLGTXXXX XXXXXXXXXT FLWV
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011069922.11e-117PREDICTED: AP2-like ethylene-responsive transcription factor AIL5 isoform X2
SwissprotQ6PQQ31e-103AIL5_ARATH; AP2-like ethylene-responsive transcription factor AIL5
TrEMBLA0A068U4A01e-128A0A068U4A0_COFCA; Uncharacterized protein
STRINGVIT_11s0052g00840.t011e-113(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22462457